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Previous Versions

Cell Ranger ARC 2.1.0 (Oct 6, 2025)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 852 MB
    md5sum: 64018a2d04f0573a6e9d5d5ed7932d82
    curl -o cellranger-arc-2.1.0.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.gz?Expires=1774668684&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=kcMn9aPDsiNJHbetJXDew1lG-uRAmGuSr-6vEYSmzQmQ8dIaNp6r1cw1B9gCWm-LiDNsk691WddMnaR1maIzxOMxKOccld5S~KsyXV23S3IcHO9k9fH2Oh7ICE39eNpEHCMVapZFx5sL6ETvC2mvbOBxQJZSWQAHAPLALKymIc7mx~UiL6cszVD5yCCavW-7VjpUFVSWfiKkU37hWFHKLDEM7ep0neSRQcCmzl3l5BVeOfPdKU-RNxIj6Hw7zbYv7VepXK5c9bQvKBdQlZPDYN~RFhF70MTfYwcJd0tfzSoEU5eJqxUVANfyVLqrszqfz75mUieBJ-~6SYmJEqzDYw__"
  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 607 MB
    md5sum: 8a8b495fad481b7da3e23eef8f99d9a4
    curl -o cellranger-arc-2.1.0.tar.xz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.xz?Expires=1774668684&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=jgj9da535b9eKG6uCFFJueClE-aiRFFgQPBfXMhWYD0dBMUMPQuLDjLi6hqpyZtf~-HU8MaiT0HJN6DvVENoSmRKc4EKEtlVkcH0J~NIx7ZzS01Zzb~RrDrNuXRv-5x-paTDop4-cWQDRyvJcZiWQgcOIECqrH9uN~7KOju6vsLQ6~9vKqTcE8NAiUvFZKfCaGbeJObPdzEJ3Aa70eBJcAZifMH6nIGPO0l1qXDQ~kOt8fajjTeuHXBkynoDjWmN7A02Z7RotBz3TapK5pU8jZRrk5K8HstekfVWRiV4Baa-WpE7CkF3Gdm0b~Ycu~e~65TCN05qzIlGI2jVedzwYA__"

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Cell Ranger ARC v2.1.0 highlights

  • Users can now perform automated cell type annotations using Gene Expression libraries.
  • Includes anonymized telemetry data collection to help 10x Genomics improve product functionality.
  • Strand information is now included in the `fragments.tsv` file.
  • Improvements to computational performance.
Release notes

Cell Ranger ARC 2.0.2 (Aug 18, 2022)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 699 MB
    md5sum: 7303f8ceee7b60113c9a0087268830cd
    curl -o cellranger-arc-2.0.2.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.0.2.tar.gz?Expires=1774668684&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=TMiuG0E6nWfMn9dfQSEoi0KnbMnvUkFWmzOvh13U0EuXZNID3BJtpmbVaiKp9NG3X4bhBW7UMauteqF6hZbt7SRKzUWdRXTiHPjVOSCxLsWGSlUoPNgyjrjT95bSTa0UYrfgCQHC0qnJzgwNk8F8t68w7ch8gs7vxfcLInLpg4~Jj4xH8se8yPLURV70k~x~p1xcaNRlj~cILEJsAk~m5rRkTaMJCGBA6luD87zH6A~7VSJ94LMn89J45MoNRmYeQ-JM~NecbTHcUZgfmePe8QZgJf8k5fD0XenmjU4IPgQ~cDgwIJWvxqbJQWBTDlqvubWVeVEK3yX1uFUiBnCzuw__"

Download is unavailable on mobile devices.

Cell Ranger ARC 2.0.2 highlights

  • New: 2024-A reference transcriptomes now available for human and mouse
  • New feature: wavelet-based peak caller to improve detection of cluster-specific peaks
  • Improvements to duplicate marking algorithm
  • Improvements to computational performance: ~4x faster, 0.5x disk requirements