Previous Versions

Cell Ranger 10.0.0 (Nov 13, 2025)

tar.gz compression
Download for Linux 64-bit (tar.gz)
File size: 828 MB
md5sum: d431343ec657c0cc8d0d7d31b9b729c7
curl
wget
```
curl -o cellranger-10.0.0.tar.gz "https://cf.10xgenomics.com/releases/cell-exp/cellranger-10.0.0.tar.gz?Expires=1765092853&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=kGRnndeXEmnVn0dISgafUPedy4X1y8ZrK2rkqJ6CZCa-WCWjhYZLLFR8tQzOI8ne6lw~MvAiazROWLAL7B2X9z1IKvjpjpIIAvHi4G-xbLUq9tmz9QkkbgsjqvDCWZQqEJcwEp4HRlWwgf1257fG5uDd9tC10iQHBxvVFhv29z6TAs~kKdPJqsx88-FoWUtd12kig4YcaSaFiOJSmCaq3R9LnrpYLeen7xOq2PiX5GoGl~vrp83l9I8su7NSX4zFpsSmy~Cv9ygepOIAnTPyTe5iWM5oziUmLy4CbL8IBc5OuX7wXb5BLbaAMp4ThhXNMpLPsVfUO7I~s~VkKOXJKw__"
```

tar.xz compression

File size: 553 MB

md5sum: 3d2a50327b64bc38108114ede6d6b656

curl

wget


curl -o cellranger-10.0.0.tar.xz "https://cf.10xgenomics.com/releases/cell-exp/cellranger-10.0.0.tar.xz?Expires=1765092853&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=TC7VWl8vi4kVKgOIG3Ryb0E0OmWqL8-wAvc2P62UIBp1MemRMnMjmSl7kIyyM6mrqd2B-GEtxTKNNj6WT7-kkd~X8MfuG5EeGpisL0tUpwxGMeIiRtR0ldwDxeUSfe8to6xieW4wmlstngTqCDco070-C4RCQ1Zn4kq-bsJGyVYo~-xBmLZzlNkBSYTbS5xbNKRTVny8Nve7638hUPYlUTW1WbJhZG1Y7nbA1W6R~FpRQ8V2q7543cvU83~9O5QTfeJIXipKG2UmdMt1IcIKcU5zzpy6uRzn4K0Thdk6oDvEBwUGYqRFZ2gAkXPdR96TFpHkcdfl~Z1ZGJoG-o5Ybg__"

Download is unavailable on mobile devices.

Cell Ranger v10 highlights

Cell Ranger v10 now supports analysis of GEM-X Flex v2 data! Users can now multiplex up to 384 samples in a single GEM Well.
Improvements have been made to the cell calling algorithm.

Release notes

Cell Ranger 9.0.1 (Feb 6, 2025)

tar.gz compression

Download for Linux 64-bit (tar.gz)

File size: 807 MB

md5sum: 2efec98bff01f7a59edaf43724fae13f

curl

wget


curl -o cellranger-9.0.1.tar.gz "https://cf.10xgenomics.com/releases/cell-exp/cellranger-9.0.1.tar.gz?Expires=1765092853&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=i9p4N8eST13Wm-wxdI90RU9x53uk43n2DLYZiqt~pva2NIXXOKoHPU5G9fqKPlpRdARDl48JB5IB7nqzh9k5kTyz0vXTlJw6oCdCT7O1C5TMkZYjDY01P8it7FCpWJp55yBdrYo6Zn-Bod9CHG~nfyKkgIMHRmptgiKWW9f9moajXDGqgXgviIeO6~5mj7hbajv5eNKy1Qv1nzZSnJh2OxZbCD1B0DpIXLoy60fhcuRCuQYY3ZsGoBRwWWCrgzCaS0Q21jxzCr9mOHQXy8piWcR1M4nbH7kddhmf9TkEHmGd-US25bI47A-QwOJLS46df4KrCAW73HIHdRWGc7aQfg__"

tar.xz compression

Download for Linux 64-bit (tar.xz)

File size: 538 MB

md5sum: 540fe4256c8d12d7f701303983ed3d48

curl

wget


curl -o cellranger-9.0.1.tar.xz "https://cf.10xgenomics.com/releases/cell-exp/cellranger-9.0.1.tar.xz?Expires=1765092853&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=VMW8VS759GtmSnJgw-Pa6NZL~smitu2ov6PdmGMKffgzf5ktlShyujGkbJbN3ZuSOM023wO3zNO3Z3GH2~kyVIS645oO7txsBxw~xSsCvhXlBBGF8b~EhIZTNbuWrsuQx84jayJFN0q7Ed4O9KB6JIOzT0YsyYf1dMLNKtbolEUpGNGMQ7o6g~5zecFc6t4TpEOesPN1WwINt9AjoVnztH-kJZQN~7IOchf6yIyWxl4QyAmCTxuChLyQF1hXedQXs~eyuUOVeBKgq5wIx36v5baydCZuv7aTO5T5xR6yDzxWbt2DDpjLyU24Ii~0gkNHJD4yAKZNb94Bnw-CGnRX2g__"

Download is unavailable on mobile devices.

Cell Ranger 9.0.1 highlights

Supports the analysis of GEM-X Universal 3' and 5' Gene Expression Multiplex libraries
Cell Ranger now enables automated cell type annotations
Starting with v9.0, anonymized telemetry data is collected and sent to 10x Genomics
v9.0.1 includes minor updates and bug fixes

Release notes

Cell Ranger 8.0.1 (May 15, 2024)

tar.gz compression

Download for Linux 64-bit (tar.gz)

File size: 702 MB

md5sum: 1d08d8005b026fc1ca3c867bc67b2dbd

curl

wget


curl -o cellranger-8.0.1.tar.gz "https://cf.10xgenomics.com/releases/cell-exp/cellranger-8.0.1.tar.gz?Expires=1765092853&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=eMH1VA1qIKDQnHfsB0TnEy1AvXv91ZVNTTrlIizL07U2KSeOKhP8aPk7nwiBG87SX4QNlCz5T3DCc3~qlXc1ArTApygafQgNraw65D7A0y-5caPhph~P2tt1wWpZBuFDr7vU9o6otkvjpGdyxeg3kNwHzjdd-MLrQNovp-Yt6Mr~4eY24LSCixtOyu4z7MSDdH7rYqi3OcpmRubGwTtiGh3dOv9akles77OocNudhp18XkE~C1ri-VY-qzQqCjdHSbm6XEkdsLeSAOjqeH2WL01kmZfskvWgvCD7pgRJlTr4nH20S1v946JC~jiqGe6dRphUhy1em-uKwQ5R7TaF-w__"

tar.xz compression

Download for Linux 64-bit (tar.xz)

File size: 453 MB

md5sum: 5d112b68f8819d50e54a9f3809cf5533

curl

wget


curl -o cellranger-8.0.1.tar.xz "https://cf.10xgenomics.com/releases/cell-exp/cellranger-8.0.1.tar.xz?Expires=1765092853&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Xtj9EK7sZvdc8424gVEkxWZ0kBRjK40YJoNWGgio66b~BA1bTzW9qmFDDmCvUnD5zRRxFwohMhIidRP5tjlzXhdGotcERektG9JiDpo2OE2ggGqUbzdE~DOpZPUo8xU9BjZe-dP84gV2HMpu9AG4QTa4-4olD7OIxxdG8JmXunzb9uSwTl~-jCjrgaqX2SVtkrTXFWCJ2mF15psih98S0jECM9KH3xK8ZiX8QMn7wAMzweTw2ndH6sceSXvgafZWIvvOwfdRTXeYmXuBhpL3OCHuuDuMntHvWPJkkpLnYwZNG4CW5VXKR6cuqhp~8F1AspWasKJijIYN37zLWYXHtA__"

Download is unavailable on mobile devices.

Cell Ranger 8.0.1 highlights

New feature: Supports the analysis of Chromium GEM-X Single Cell Gene Expression v4 and Chromium GEM-X Single Cell Immune Profiling v3 libraries
Support for Low Throughput (LT) libraries has been disabled
v8.0.1 fixes bugs and introduces a new optional parameter (min-crispr-umi) to customize the minimum number of CRISPR guide RNA UMIs for protospacer detection

Release notes

Cell Ranger 7.2.0 (Sep 13, 2023)

tar.gz compression

Download for Linux 64-bit (tar.gz)

File size: 653 MB

md5sum: 85e2573e80a6f8656a42ff09460463e6

curl

wget


curl -o cellranger-7.2.0.tar.gz "https://cf.10xgenomics.com/releases/cell-exp/cellranger-7.2.0.tar.gz?Expires=1765092853&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=mXD1kxtXArgdQrr3taQXw06VTurhbCOGH0CYghELHlsIjASWFz6djASO5sjli7re8iaa54UxYRaYpMIF9K28VYqiHOXkI494Ebx6uiwL7rmn7PMig4TyklBE2LV~2GMlEg~-ASuNQUFDjlmPwF52tEdrO-9y72iF8oKZuFwDmYyFQkQAYqhGU2a23sMfOnOXA1QltwiY1ex-2wSQri~Yne~~4hOB-yFq~g8pyffM9RwsiFfY~3Glng2CHOGbhH3W0PIJJ3so23GGETeUjmPEleRTQjvScQ3jFYE2Utq3LlF5RoGj30tanm8WuiZ-o2efmg6kpHXTMrxpPGPS55LxnA__"

tar.xz compression

Download for Linux 64-bit (tar.xz)

File size: 436 MB

md5sum: 64f2c8c813dbdc030a80ad59096dc9a2

curl

wget


curl -o cellranger-7.2.0.tar.xz "https://cf.10xgenomics.com/releases/cell-exp/cellranger-7.2.0.tar.xz?Expires=1765092853&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=TFk9i-L3Pqv5W5YI55Jn5Zvu363gqBJ89uzzLhrJUsz95EOEeKRDwF115VwOs4n3kVBbhcavmdxFtBh~XKQiDJ9qwMBjQQsBRPTjoYv~tQ4aHPtnYhoNcH~aXfKqh0~f5hFoMeYAceuxO6Nwvy37t5HSVjb1CPZAG~WIm4UjwTTZrWEnsPz32OzgiEO2TXdOHFB961an2sky2DVnNDhGCiVkwj-EAKL-iC7I-ArXn-sqtGBC5rzcMehBBp6p5Q6aTaz7RCgo9d-bEzFrnpoeN6irMKV2jIz6jTt0stcIe6oWYkqhVPX~15nDIHH6fLHLAAXFOZGine6~odP94JjdHg__"

Download is unavailable on mobile devices.

Cell Ranger 7.2.0 highlights

New feature: Supports the analysis of Multiplexed Gene Expression with Antibody Capture (Cell Surface Protein)
New feature: Supports the aggregation of BEAM (Antigen Capture) libraries with cellranger aggr
Several improvements to the web summary output files generated by cellranger multi and aggr pipelines

Release notes

Cell Ranger 7.1.0 (Dec 7, 2022)

tar.gz compression

Download for Linux 64-bit (tar.gz)

File size: 639 MB

md5sum: 0938af789631800b20176527063c029a

curl

wget


curl -o cellranger-7.1.0.tar.gz "https://cf.10xgenomics.com/releases/cell-exp/cellranger-7.1.0.tar.gz?Expires=1765092853&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=orrH-bDn0hhijDnm-Z~9-fHDqq54UMDx0cCdL1qx81qFprqmDn9lS15eDEnBuoiqUfWfrtpd~SxSIQEzPkzDLIoe4fIucUdgXw22fWmKf5b1d82~WZEBasURb4ddD62wxzT3MQiNtfysZBwuyZgVj0YVMDGOu4dYDgG9oPxUi2MzLQsgWsNCOANbIZpSPzNik2vi4V7KCXoQqB7fqDRPbbl4oz2Ml5w9g8M1fb2j~IumARcy9TmUAR8xXCWI5D41Z9aOMWQilcrMedmWLTS37sZsf0PNra4mlHm5tzQFTDJpXYnNOSjh2-KuYiK8u995qTfPyYRLQIV4a29gCuksXA__"

tar.xz compression

Download for Linux 64-bit (tar.xz)

File size: 379 MB

md5sum: 1b90a1b0a785c34ecd5ed9227f72f78f

curl

wget


curl -o cellranger-7.1.0.tar.xz "https://cf.10xgenomics.com/releases/cell-exp/cellranger-7.1.0.tar.gz?Expires=1765092853&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=orrH-bDn0hhijDnm-Z~9-fHDqq54UMDx0cCdL1qx81qFprqmDn9lS15eDEnBuoiqUfWfrtpd~SxSIQEzPkzDLIoe4fIucUdgXw22fWmKf5b1d82~WZEBasURb4ddD62wxzT3MQiNtfysZBwuyZgVj0YVMDGOu4dYDgG9oPxUi2MzLQsgWsNCOANbIZpSPzNik2vi4V7KCXoQqB7fqDRPbbl4oz2Ml5w9g8M1fb2j~IumARcy9TmUAR8xXCWI5D41Z9aOMWQilcrMedmWLTS37sZsf0PNra4mlHm5tzQFTDJpXYnNOSjh2-KuYiK8u995qTfPyYRLQIV4a29gCuksXA__"

Download is unavailable on mobile devices.

Release notes

Cell Ranger 7.0.0 (May 17, 2022)

tar.gz compression

Download for Linux 64-bit (tar.gz)

File size: 600 MB

md5sum: 98ffff631adb7298d38194073626817f

curl

wget


curl -o cellranger-7.0.0.tar.gz "https://cf.10xgenomics.com/releases/cell-exp/cellranger-7.0.0.tar.gz?Expires=1765092853&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=cE3kN6YaF3iz0-HcnWERfjxIT08VBG3SgTV7RKoJl99xzcDPY6mFwBNLjjAmkKBv4xxMRbCNopM2FoOap9E7oh-Tst-CL3viby8jmTT0X3pEffUANLNbuzvE76ouey82lTNp6UydrlszxkrlC80MsTzE5ffIfW2KYJ8Bzm7-6-T23Kql49C2PdgkRXWSGtp5bENOEVJWnxkQQyj1O7-tKQoKgAHq1dkLGGoeNAZMzK7NbnaXrSfPAXd7wA13tyWoxIOrxAc-WvGfLBntZdnbfFoKmkTYfB67SRktnQ95uhundXKh6snm~-dvjTXhfx4urgee2d4F9KdqlND~eZO2aA__"

Download is unavailable on mobile devices.

Release notes

Cell Ranger 6.1.2 (Oct 25, 2021)

tar.gz compression

Download for Linux 64-bit (tar.gz)

File size: 768 MB

md5sum: 310d4453acacf0eec52e76aded14024c

curl

wget


curl -o cellranger-6.1.2.tar.gz "https://cf.10xgenomics.com/releases/cell-exp/cellranger-6.1.2.tar.gz?Expires=1765092853&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=X8L0YXoz-~2H-y-eBzeTwvSMsXXbNRtbY6ewPUOMoM3b14CckGuqD2X2lEKI09IsPVM~Azam-fls4CBezmS3Ey7vuMI9~K7Y2jbAX4Ip4x~2zRIeikozbTLyk6lycJRqD4Y-pYKD1qd4Jt4swSerFATamAkgsFjGJO8mhtkp99LdgPTnk1~K6V2Ioi3QcuONLITmnpI~6OZYWDuutcVElTRtcRa7Nmp5g7GgzwzXQsl3XKKobXofHBEwb0DsiyQGm07eViugwlOviWqQUUzs0NsZITNcNwhBX9RA2nvDwY1UMCfjfSfOsxxc~B9YlzqU0RSwc2P8PoDEqRctoT~dsg__"

Download is unavailable on mobile devices.

Release notes

Cell Ranger 6.0.2 (Jun 21, 2021)

tar.gz compression

Download for Linux 64-bit (tar.gz)

File size: 1.1 GB

md5sum: 5e98504fcccd3e7257c167f0fea399fa

curl

wget


curl -o cellranger-6.0.2.tar.gz "https://cf.10xgenomics.com/releases/cell-exp/cellranger-6.0.2.tar.gz?Expires=1765092853&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Rqhxn0Sz8QBKPhuCpqyoZfD8qCLWR9KYtYVX~uSF~ger5UH168fbSUQgalpirGecc-ztU0k3X5asZNDL2VzCLETJoGZ44ye42scwrxGxehLh2Le6seMhZmbbzXgmUwnjcQy2sDM6TDglifC-eea0KHNPyDT1jh6OhwoTGHXYB3qYwzrq8pOVFdDrjXtGxHjqT9NWWo9baT7HFKHIjLX7u7W4Wi6doWbHZEfshhvuOeGClhlI8tHjUCNSovBpaKS3vpfsZccDarDA~7P3t2pT0zVzHqI-p3mcYA7uml-sHaeCdb9GqE5gvI-zFUaLtHftTnGoI-qcWJC3yv4yfM3mbg__"

Download is unavailable on mobile devices.

Release notes

Cell Ranger 5.0.1 (Dec 16, 2020)

tar.gz compression

Download for Linux 64-bit (tar.gz)

File size: 955 MB

md5sum: 8b9d217c160d52902ebcde8608765119

curl

wget


curl -o cellranger-5.0.1.tar.gz "https://cf.10xgenomics.com/releases/cell-exp/cellranger-5.0.1.tar.gz?Expires=1765092853&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=eaDgc1F9kEsZRD3xgaCK7BNLTkU0Kuig2f406-o6XUrsVmdFWvqQNSgWhli9XssyWhjqqLAo~0jex3jMS7wW62U90Uh36T9NPznOv3LXhMJ9BFgBX1Vx2aYnsZ0Ey8F6SuNs0hyl5D3Jy5oore5zFNhAHnd5ZAMhYwvFewwtyj6CryBwATUcu53-8qlWLiDUWIZ3odY1lKcQt7A6kYslnie09DIeh-IiwSLwW~Gk5enSxS~R-9O3BHgJQtzo00-KCCzyQgO8YZy5m58PK0-9-qzX0vELxY5wiy3NccTkJItpH3TezVbesJ829TUZEsbIkWc0MscdSZrhTYhBL-67nQ__"

Download is unavailable on mobile devices.

Release notes

Cell Ranger 4.0.0 (Jul 7, 2020)

tar.gz compression

Download for Linux 64-bit (tar.gz)

File size: 972 MB

md5sum: cc4ed44a57570f6ecb3ea5881e01511d

curl

wget


curl -o cellranger-4.0.0.tar.gz "https://cf.10xgenomics.com/releases/cell-exp/cellranger-4.0.0.tar.gz?Expires=1765092853&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=DVST5y3TAlY6thvpX3KlGAho0g1427Er9nr9YxxRPPPhhKpcLLCOEN~C2Yvrbf~ZBIK79MoO-Uj05Xc~KH9Z2vItxcMBZ-S6HpggXaf~C5zvO4u35ODNlPgdtiLpOv81Bs6DEb9jjO3n4W2qkitIv8tm-XsnblJm9rj9XSSmwck8beFDZbgR0OBtAjC~HpADczv6d6uyhcHpAC1qVOs19q~txz4aKUsuiqwGCykcNQtycQvsVR8UBjTiK3DS9OeRrFPQ26dL9GfJYn7CJLgLyyzieni6EEbpY2KqtiioE-0x-ZoraS173UJwgtwMdg2ujDQidp85uty1IFFNpQrhjA__"

Download is unavailable on mobile devices.

Release notes

Cell Ranger 3.1.0 (Jul 24, 2019)

tar.gz compression

Download for Linux 64-bit (tar.gz)

File size: 1.1 GB

md5sum: a362d62530e9d6a653e5bad5b9c19aba

curl

wget


curl -o cellranger-3.1.0.tar.gz "https://cf.10xgenomics.com/releases/cell-exp/cellranger-3.1.0.tar.gz?Expires=1765092853&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=PMAreP34mGUjzf9tgmhpJ46JWytwsc1QOx-XAeQZ3LQ2JlN4Q1xoGFIxjBwCIhyXh9gSVEeNmJ57Mz-6G6i0Wm2EN0d9Ng2h-kTpu21AGcwUE6nDpt03qumj00xTMAR5bCQ1EwyixaW28rAkJre4gy1hZtvz0MD45j-ZKu8TRiT0x2~w8bHjtXydSc8PF5GIt55kvNA~6go5au~6mg-f6sKe9Gj5OeTQTo-cAamfBIN6qd1sclXzF3vJN4Ni9jdWAs-wS9FwyfRayQtcqtUnHXFBzLsukztx3XE1VL4-pAX9qdOKkou524M0AUs1glDF-EmD1XZkPhu1f-lxIJdbHg__"

Download is unavailable on mobile devices.

Release notes

Cell Ranger 3.0.2 (Jan 15, 2019)

tar.gz compression

Download for Linux 64-bit (tar.gz)

File size: 955 MB

md5sum: 73f3766579e800015f82daedb388fcd3

curl

wget


curl -o cellranger-3.0.2.tar.gz "https://cf.10xgenomics.com/releases/cell-exp/cellranger-3.0.2.tar.gz?Expires=1765092853&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=lfviLj4YIiS4vZ9sTi7~OrSzTfyubVebPXViKEyN6~hXPqND8CygaCcB0iZoPbxlZuqAHI80Rajcg5idT1-B3MtXUMLnpWFN9KL0AIWFl8hU59l0ax02eSGUgurfjOkTr625ZhrDoOsgJxfOwFKxvTbugSwv-HnKJh4-eVM0SOePrseeuyq-zYXX7TcdiapHaVy7G5HhTWYw6FY~iqCcv70ov~2a~iWjeCrXA0GhpDeXc~g0wOCvGuWmsjK~m21M1Ojk0Vh8mzRAjMIK-gF5Sp7zQo2rysCxliPvNpIHIZAWmD4DRjq~z7SXvKOmA~aGAq1ZEOKeQT8P~GFauwirMw__"

Download is unavailable on mobile devices.

Release notes

Cell Ranger 2.2.0 (Jul 31, 2018)

tar.gz compression

Download for Linux 64-bit (tar.gz)

File size: 663 MB

md5sum: 021a7c0059c17b29be79f5f10d7017e7

curl

wget


curl -o cellranger-2.2.0.tar.gz "https://cf.10xgenomics.com/releases/cell-exp/cellranger-2.2.0.tar.gz?Expires=1765092853&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=jPBcWMFC37AWbqxWp~otFbkV61R8xWZen~hMeWtyLhejuSXAPT4t6GKIHK3EXMDZLVyecQocabncot3rZBqCFV0OvEEmFt5a5mSS9SvIW90maTuoC-tWmko7-20bYd4ohtIXHr2YF0MUxNWICjDGJclW9f6FPb6MUwP8KIf3BkaybVOCUwPqn4n~~iVdhFDH~PL7UJEaMsBT8~7QBLKbswehVmbdxycpBW-TzGjhhIW0AeqYY-Lp-~p8VwFBVfwMDidIdfWyN~Bs~a5iyIBgEY6eWRnoqGcn4D27y8q6XvXzXH3eWycYiw09ynNMDlbYJjV3vkvrmalj-4zVrLVEyQ__"

Download is unavailable on mobile devices.

Release notes

Cell Ranger 2.1.1 (Feb 26, 2018)

tar.gz compression

Download for Linux 64-bit (tar.gz)

File size: 683 MB

md5sum: 52ee46d3cef8d48b17953d6df27aeaa4

curl

wget


curl -o cellranger-2.1.1.tar.gz "https://cf.10xgenomics.com/releases/cell-exp/cellranger-2.1.1.tar.gz?Expires=1765092853&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=A6xL1y~AuMAmox43gOVLPSI45D218ywC0NS6auqgd~ELParAyJdpKrW-LiK1FxFJ~F~YhsNPww88D5h1kXefa8zVcVKoqLcopPoWVHUdiooYSRRK~DlGXodukJAhYPZUzpVziUweWizh-G3qcZe3mT4Sp3KEO3~55EpB4JxZ22fSAet7ZhlRJ4ZwPeEp8J8Ji4g4-SC2ywOWl7MWrJMoBiZPvVjCNEmtYyK8bS~xwmdX3eFy1JYueZyA9s3EyTWZvhZd2AXXA8k33vOelGKXih~aZgQ3G6e1EFrv3cSy3RqFADIcMvJSioyEc3jL5NR1fLl0HUTx5KaKGBhmU2Ezdg__"

Download is unavailable on mobile devices.

Release notes

Cell Ranger 2.0.2 (Sep 8, 2017)

tar.gz compression

Download for Linux 64-bit (tar.gz)

File size: 732 MB

md5sum: 4a2526e556f549fadba4a709819d5d05

curl

wget


curl -o cellranger-2.0.2.tar.gz "https://cf.10xgenomics.com/releases/cell-exp/cellranger-2.0.2.tar.gz?Expires=1765092853&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Jue9dzmpUY-UhgdJgh3FR1NDJB1JSBo6x-a~KoAN53j5MmBCflXZu1m8eiRzzmlibUmoyvO16nvjLMtS9~nzP5jDlBK4ZC-6HkUPnxmWUxvf6I~2l6ifW5FvWk7p9TZfNvHDZ0xZ9o63EgBq7GXmjiYP507GtMY2Qms-0XeK6qXGiDM7FxF~j1HsOD0W1ePAaxYZPuRVRdOWD0sVhVmD62KMq7VtQ9LycOiAwbYXq9PPxKtUnrbINgv2nSYDL4x3r-RAiUD8FNEpHBhZFHGBcLWf0V58iho9HvLeYJeoalScFk0H-7oWPz3z6AfhbKRMFVrOGzweSr-C0xsZ5tDQuQ__"

Download is unavailable on mobile devices.

Release notes

Cell Ranger 1.3.1 (Feb 20, 2017)

tar.gz compression

Download for Linux 64-bit (tar.gz)

File size: 717 MB

md5sum: 524bb6a17ad10e242cd294678f4cf7d0

curl

wget


curl -o cellranger-1.3.1.tar.gz "https://cf.10xgenomics.com/releases/cell-exp/cellranger-1.3.1.tar.gz?Expires=1765092853&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=SZ7VYusUYr12ddvL3sT6qX6vEZvWAfYFq-d4sWQP8d5qXdfNo1MACynYGoQi-grCu1aOhauloexLo6khM1y-R-TFnBJGd3D78MlH3OdFcQ2aWMmaF2tQJigPE9iZvLugeL3CGbbcGy~1CnrVGAaEc3DT2cUtzCU0U-liDRcnQVFkSIfvvOCIdrZv7kw3TNf-fs5bzz421cu0BTP-pSabNNghu~8KYo68zDFBmjBG1-8TaNOAKi9nYURrX9n3syfpL2I09Dgp1JGBuC9HysA6s2bcl7~D3RkDiv9kGDX7qht0wYAdFFBKzy23Wv~F1YTcDomnuZwXR5ldFkwttc4BiA__"

Download is unavailable on mobile devices.

Release notes

Cell Ranger 1.2.1 (Dec 16, 2016)

tar.gz compression

Download for Linux 64-bit (tar.gz)

File size: 712 MB

md5sum: 889dc2908aff03e2a0430786e5c09f45

curl

wget


curl -o cellranger-1.2.1.tar.gz "https://cf.10xgenomics.com/releases/cell-exp/cellranger-1.2.1.tar.gz?Expires=1765092853&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=j23ZHc4ARZGpPEFZeWpovdQRxwNLYcbXj-eB6BguB9yhQxWqYW9llu-jwNx4VNKkarWORF7y7PnTJ~GlLSVzESWelaf3e0bzC55aLVUrime7ulV7U14~4Cm14HIP03NrpIMwsJY9IgmqmNJj~XDnNYOIKt9EZiUUv3ea7B8WPbrYvb1hBpehUNqGp99l1PRxNRD7ag02WhGhDRrsbHyH40sFl7y6aGnmQvgOQyBRg3xcF70Q2TVz~Jfwm9Tw9IboGxJ5HV2P1GqV2fdOyrwT8e~wXxxc4I5i7jqbRuCN5x~2~BKuoJLkjnuUXUnqTNVgx6qNzLs~0jP4JZ~E81CC~Q__"

Download is unavailable on mobile devices.

Release notes

Cell Ranger 1.1.0 (May 26, 2016)

tar.gz compression

Download for Linux 64-bit (tar.gz)

File size: 395 MB

md5sum: 9bdf639cd135bb991267683f21469b4c

curl

wget


curl -o cellranger-1.1.0.tar.gz "https://cf.10xgenomics.com/releases/cell-exp/cellranger-1.1.0.tar.gz?Expires=1765092853&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Cj-jqDMUqOd1ZBLkSSp5l3PwapjDW6LuzNPbnxNcAEWbi8V8RUF48lz9q82T-qAXFf8~7rUx0gPjQtIasb3B04yBK-j0vFGFf7Oo~sTWKQJz93VsSGlTVjeYtDTKmLkqHAEVQx1JvUq7Ei2qZba7AioJoEL4kDnjKagIsV3kGefdwMjvcy6nv3ylNNEqasqvQjkw6-GT9pxEpGEl7d~dhFDjnFvAimZjQLM7lRgWD9MZS09uW3W5F-nCCJgZXGBDZfXSRm1KtW4JRxnUnuP5ZMoMVNRtvErTUWcks3jJ3g8EjLhatiPlOwbWJbFC1xtWz0OLO4kzDlZ0oYZP6hgfKw__"

Download is unavailable on mobile devices.

Release notes

Cell Ranger 1.0.1 (Apr 25, 2016)

tar.gz compression

Download for Linux 64-bit (tar.gz)

File size: 395 MB

md5sum: 41e529295ceabd111deba0d9f190d791

curl

wget


curl -o cellranger-1.0.1.tar.gz "https://cf.10xgenomics.com/releases/cell-exp/cellranger-1.0.1.tar.gz?Expires=1765092853&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=I0UMXVVW-CGkxoIZKHALtb-5zrquPhH8wWwTebcgJjtoDnVuQOT-xcKdqFRyej2PNRIbt1xLm9GUbqA5iCbXoPrQqn7EXACQNaAATFAsD4K0gV5o1lMSTINnz9AeshNFgFRUM0rLQs8y-ZXzyB7Z6ipGwUjPAYq0DH7ouUFi1PUWbIlFaZf9fKVPapJOAVOXMKNDsLi4QPlTEAwrnY~P-qqDZtjwgVWxiLEU6zKhc1n0ukQ8dWRjAfpS5hlLcQqfSx6wIPr6usd7bOIR2DffpM9XhoiNovDt0CUS~ebmHRoaSKAyQtdgL-IifVBdDm16tyy7I0tQ9zVV8p1bxxmeJA__"

Download is unavailable on mobile devices.

Release notes