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Previous Versions

Previous Versions

Cell Ranger ARC 2.1.0 (Oct 6, 2025)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 852 MB
    md5sum: 64018a2d04f0573a6e9d5d5ed7932d82
    curl -o cellranger-arc-2.1.0.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.gz?Expires=1774668469&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=H4eY4ZrWCc1igGWW7oEnvYf0txIgSJeCkc1EPHFOjnOvo6t84hS6v3zkFyuyQaAvmzWEAbI9kn6VtvjzYQCwp7evRiZ9cFBUB82mO9J-jhLmnQzGUHJg2JEY9SVbKriQJHUwxEdZwvADI-oHhhb1EgQYXX1~moScZUuFL57DHW4tPhEICo9n~PGKhb7Lu0A2daSZy~oMf6lYKTDUv-Dc2hYk80z3Gn~eXa05e0WhKmFLwBBpqSjolCEHILglXgwB7nD-OKAcOjfL0budC5HY8aXgasYLzAVjKeEQ17fpSCc0RUJuRpGXiCOy5q6UIE4PwYSWKcPHml3SS7PIFFe2tQ__"
  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 607 MB
    md5sum: 8a8b495fad481b7da3e23eef8f99d9a4
    curl -o cellranger-arc-2.1.0.tar.xz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.1.0.tar.xz?Expires=1774668469&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=adLJDahiNFFLd180qy-CqKyd6DiAyMDHdUgpxXqXO1TUaDSmrx~G~-HR7wcQBFUcrg48GL4Mq~ijZikCVb8mQ2hjoCrOF~F01lDvSsoi-Vl3J1uUwdtLEydugDK6wekQLBn8DKdWBO0Pj1GdvyGD7adi0xuo-7s6QE-hYPmuV3gFOEP5F8JNqBtQK0J~c7hyh0xU6diLjFafInF04axHsFNbzAktWFcsqr0Yrjh9mJBzg5scXGg-iE4oVvBn3iANx81PW50LG0D4K52ZnDlRK37z4K9tS9oFNN0tHttky4HV1~2F3VZB8m0DoLY~LGNEXXIrcs-Y86Ld-lPZ~Xc4Lw__"

Download is unavailable on mobile devices.

Cell Ranger ARC v2.1.0 highlights

  • Users can now perform automated cell type annotations using Gene Expression libraries.
  • Includes anonymized telemetry data collection to help 10x Genomics improve product functionality.
  • Strand information is now included in the `fragments.tsv` file.
  • Improvements to computational performance.
Release notes

Cell Ranger ARC 2.0.2 (Aug 18, 2022)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 699 MB
    md5sum: 7303f8ceee7b60113c9a0087268830cd
    curl -o cellranger-arc-2.0.2.tar.gz "https://cf.10xgenomics.com/releases/cell-arc/cellranger-arc-2.0.2.tar.gz?Expires=1774668469&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=IIKEjvE9QeJoibtI2hXCdQM5c9cdnlidzHV3V9VG3tDlnvQ5aXyLy8PDBJC9dn-QjhSn5JGlHWDiEZX87PmaGsjXpJtX40bWA4BRVX7greAkvfEKntjk6lnVVIMGxtgyfobkKq3K4Pzht9EIV2FDGGD-zeTyh6ZU6P-aJOVYD62v2~FkxRkg9fTpcvpqek6rPEQdcOf6I1N2qU7STShgbNGxX354kMotA9IPlqYEchOuMAcDo4Xo3dAmsYdm6gPcIOhranpt7MADglXo~JFMSCRz74IiRRSiEb6HdibysecuS2B6rLh-YGFaP617fqHp-FAlCoOi0vfaEI0rMnvnkA__"

Download is unavailable on mobile devices.

Cell Ranger ARC 2.0.2 highlights

  • New: 2024-A reference transcriptomes now available for human and mouse
  • New feature: wavelet-based peak caller to improve detection of cluster-specific peaks
  • Improvements to duplicate marking algorithm
  • Improvements to computational performance: ~4x faster, 0.5x disk requirements